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Home   •   Support and Training  •  SciFinder  •  Solutions  •  Archives  •  Search Tips Example (Locating isotopically labeled compounds)
Locating isotopically labeled compounds

Locating isotopically labeled compounds

Suppose you are interested in locating information about the different molecules containing deuterated aspirin.

What is the best way to do this with SciFinder?

Use these SciFinder features to locate deuterated aspirin molecules:

  • Explore by Chemical Structure
  • Refine tool: isotope-containing substances

To retrieve the deuterated molecules, you first need to create a structure diagram of the parent.

You can follow one of two pathways to create this structure diagram:

1. Draw the structure diagram yourself. To do this, click Explore.



3newtask

 

Click the Chemical Structure option under Explore Substances.

4exploresub

 

Draw the structure diagram of aspirin. Click Get Substances to retrieve molecules containing aspirin.

5draw

 

2. Dont know the parent structure? No problem. With the NEW quick search feature of SciFinder 2007, you can use an existing molecule as a model. Click Locate to retrieve the substance diagram of aspirin from the CAS RegistrySM record.

6locate

 

Click the Substance Identifier option under Locate Substances.

7locate

 

Type the common name aspirin as the substance identifier.

8typeaspirin

SciFinder presents the CAS Registry record for aspirin including its structure diagram.

The NEW "quick search" feature offered by SciFinder 2007 allows you to import structure images from the CAS Registry record. Click on the structure diagram and a pop-up window appears with additional options. Select the Explore by Chemical Structure option.

9aclick

 

SciFinder quickly places the model structure diagram from Registry into Explore by Chemical Structure. Click Get Substances.

11structure

 

Select the Exact Search option. Click OK.

12select

 

SciFinder locates substances that contain the structure diagram of aspirin (highlighted in red). To obtain just the isotope-containing substances, click the Analyze/Refine button.

13retrieve

 

Select Refine and click the Isotope-Containing Substances filter.

142refine

 

Since you want to locate all compounds of deuterated aspirin, select the first option and click OK.

15refinebyisotope

 

SciFinder presents 21 isotope-containing varieties of aspirin. Note that C11, C14, and tritium isotopes are included. Since you want only compounds with deuterium, select the relevant compounds (in this example, there are 9). Click the Tools menu and select the Keep Substances option to save the 9 compounds containing deuterated aspirin.

keepsubs1

 

Click Get References to view all the references linked to these 9 deuterated substances

18keep9

 

You want to view all references linked to the 9 deuterium-containing substances.

19getallsubs

 

You can now view a list of document references (in this example, there are 8) linked to the deuterated substances you selected. Choose a reference of interest, click the Microscope icon for article details.

20viewlist

 

The Microscope icon presents bibliographic details, the abstract, and intellectually-generated indexing terms.

21detail

 

Scroll down the document record and you will see the structure image of your substance of interest. Obtain additional information by clicking

  1. the CAS Registry Numbers of compounds mentioned in the reference
  2. links to citations
  3. the Get Related button

22scroll

 

Click Get Related to view additional related references.

23docrefs

 

Retrieve additional article or patent references citing your original 8 records by clicking Citing References.

 24getrelated

 

SciFinder presents records citing your original references. Click the Document icon to link to the electronic full text of the selected article via the ChemPort® Connection.

25records

 

ChemPort shows you that a PDF of the article is available from the publisher Los Alamos National Laboratory. Click the link.

26chemport

 

You can skim through the article of interest now or download it for a more comprehensive reading later.

27fulltext

 

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Updated 4/26/2007 2:06:03 PM
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