The BLAST Report with Alignment Data will create a report by merging BLAST alignment data obtained from CAS Registry BLAST® with selected fields from a transcript containing displays of the associated CAplusSM and/or REGISTRYSM records. Note that:
The Registry displays must include the RN field
The CAplus displays must include the IT field
The BLAST alignment data for each RN will only be inserted once, after the first appearance of the associated RN in the transcript.
To create a BLAST Report with Alignment Data:
Within CAS Registry BLAST: Follow the steps described in Get STN Sequence Data to obtain the BLAST alignment data and the transcript of the related CAplus and/or REGISTRY records.
Within STN Express:
From the main menu bar select Results > BLAST Report with Alignment Data. Or, from the STN Online and Results window select File BLAST Report with Alignment Data.
The Select BLAST Reports window opens.
Select one or more alignment data files using Browse to Add to locate and add files and Remove to remove a selected file. The most recently used file is included by default.
The default is to exclude alignments longer than 1000 residues and to include both REGISTRY and bibliographic data. You may change those selections.
Click OK.
The Report Tool window opens. Select from the buttons on the left side of the Report Tool window. Alternatively, use the Next and Back buttons to move sequentially among the screens. When selected, each button displays a screen with options for you to choose. Once the transcript is chosen, you can click the buttons for different screens in any order.
Button |
Function |
Select one transcript for the report |
|
Select a template for the report from those previously saved |
|
Select which answers and transcript components to include in the report |
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Select and format the fields to include in answers |
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Customize highlighting of terms in the report |
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Define the content and format for the optional cover page |
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Define the content and format for the optional header or footer |
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Create charts for the report based on data from fields in the transcript(s) |
The Report Tool window also includes the following buttons on the bottom of the window:
Button |
Function |
Save Template |
Save current configuration as a custom template for future reports |
Preview |
Open preview page for the report |
Finish |
Produce the report once all content and style selections have been made |
Back |
Go back to a previous screen |
Next |
Go to the next screen |
Cancel |
Cancel the report creation process |
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© 2017 American Chemical Society. All Rights Reserved.